BioTech Encyclopedia

Materials researched for genomics

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lab Base editing and prime editing 2019

Prime editing

Anzalone and colleagues described prime editing, which writes new genetic information using a catalytically impaired Cas9 fused to an engineered reverse transcriptase; they made over 175 edits in human cells, including correcting sickle cell and Tay–Sachs mutations.

As reported in: Anzalone, Randolph, Davis et al. (2019). Search-and-replace genome editing without double-strand breaks or donor DNA. Nature. doi:10.1038/s41586-019-1711-4

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lab Base editing and prime editing 2016

Cytosine base editors

Komor and colleagues fused CRISPR-Cas9 with a cytidine deaminase to convert C•G to T•A without double-strand breaks, correcting 15–75% of DNA with typically ≤1% indels.

As reported in: Komor, Kim, Packer et al. (2016). Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage. Nature. doi:10.1038/nature17946

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lab Nanopore sequencing 1996

DNA through a membrane channel

Kasianowicz and colleagues showed an electric field drives single strands of RNA and DNA through a 2.6 nm channel, with blockade duration proportional to length.

As reported in: Kasianowicz, Brandin, Branton et al. (1996). Characterization of individual polynucleotide molecules using a membrane channel. Proceedings of the National Academy of Sciences. doi:10.1073/pnas.93.24.13770

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